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ZBTB44 zinc finger and BTB domain containing 44 [ Geotrypetes seraphini ]

Gene ID: 117347107, updated on 19-Mar-2024

Summary

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Gene symbol
ZBTB44
Gene description
zinc finger and BTB domain containing 44
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See ZBTB44 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 13 NC_047096.1 (45972823..46073567)

Chromosome 13 - NC_047096.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 15 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8 Neighboring gene uncharacterized LOC117347769 Neighboring gene ST14 transmembrane serine protease matriptase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047096.1 Chromosome 13 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047096.1 Reference aGeoSer1.1 Primary Assembly

    Range
    45972823..46073567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033917516.1 → XP_033773407.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A6P8NCC0
    Conserved Domains (5) summary
    COG5048
    Location:378 → 446
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:398 → 418
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:486 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:410 → 435
    zf-H2C2_2; Zinc-finger double domain

  2. XM_033917515.1 → XP_033773406.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A6P8NCC0
    Conserved Domains (5) summary
    COG5048
    Location:378 → 446
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:398 → 418
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:486 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:410 → 435
    zf-H2C2_2; Zinc-finger double domain

  3. XM_033917517.1 → XP_033773408.1  zinc finger and BTB domain-containing protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A6P8PF91
    Conserved Domains (1) summary
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)

  4. XM_033917518.1 → XP_033773409.1  zinc finger and BTB domain-containing protein 44 isoform X3

    UniProtKB/TrEMBL
    A0A6P8NRJ4
    Conserved Domains (4) summary
    COG5048
    Location:378 → 446
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:398 → 418
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:410 → 435
    zf-H2C2_2; Zinc-finger double domain

  5. XM_033917519.1 → XP_033773410.1  zinc finger and BTB domain-containing protein 44 isoform X4

    UniProtKB/TrEMBL
    A0A6P8NX87
    Conserved Domains (3) summary
    sd00017
    Location:398 → 418
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:396 → 418
    zf-C2H2; Zinc finger, C2H2 type

  6. XM_033917520.1 → XP_033773411.1  zinc finger and BTB domain-containing protein 44 isoform X5

    UniProtKB/TrEMBL
    A0A6P8PCY9
    Conserved Domains (2) summary
    sd00017
    Location:12 → 32
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type
Nucleotide Protein
Heading Accession and Version

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