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LPL lipoprotein lipase [ Geotrypetes seraphini ]

Gene ID: 117346328, updated on 19-Mar-2024

Summary

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Gene symbol
LPL
Gene description
lipoprotein lipase
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See LPL in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 1 NC_047084.1 (376923587..377022250)

Chromosome 1 - NC_047084.1Genomic Context describing neighboring genes Neighboring gene leptin receptor overlapping transcript like 1 Neighboring gene store-operated calcium entry associated regulatory factor Neighboring gene E3 ubiquitin-protein ligase TRIM39-like Neighboring gene uncharacterized LOC117346364 Neighboring gene uncharacterized LOC117360746

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047084.1 Chromosome 1 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables apolipoprotein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipoprotein lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipoprotein lipase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047084.1 Reference aGeoSer1.1 Primary Assembly

    Range
    376923587..377022250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033915733.1 → XP_033771624.1  lipoprotein lipase isoform X2

    UniProtKB/TrEMBL
    A0A6P8NM03
    Conserved Domains (1) summary
    TIGR03230
    Location:36 → 476
    lipo_lipase; lipoprotein lipase

  2. XM_033915727.1 → XP_033771618.1  lipoprotein lipase isoform X1

    UniProtKB/TrEMBL
    A0A6P8P9J8
    Conserved Domains (1) summary
    TIGR03230
    Location:36 → 476
    lipo_lipase; lipoprotein lipase
Nucleotide Protein
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