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XYLT1 xylosyltransferase 1 [ Geotrypetes seraphini ]

Gene ID: 117345688, updated on 19-Mar-2024

Summary

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Gene symbol
XYLT1
Gene description
xylosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 11 NC_047094.1 (29833911..30234858, complement)

Chromosome 11 - NC_047094.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S15a Neighboring gene 60S ribosomal protein L31-like Neighboring gene nodal modulator 1-like Neighboring gene multidrug resistance-associated protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047094.1 Chromosome 11 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047094.1 Reference aGeoSer1.1 Primary Assembly

    Range
    29833911..30234858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033914711.1 → XP_033770602.1  xylosyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A6P8N548
    Conserved Domains (2) summary
    pfam12529
    Location:567 → 747
    Xylo_C; Xylosyltransferase C terminal
    cl27418
    Location:282 → 534
    Branch; Core-2/I-Branching enzyme

  2. XM_033914709.1 → XP_033770600.1  xylosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P8NNE8
    Conserved Domains (2) summary
    pfam12529
    Location:567 → 747
    Xylo_C; Xylosyltransferase C terminal
    cl27418
    Location:282 → 534
    Branch; Core-2/I-Branching enzyme

  3. XM_033914710.1 → XP_033770601.1  xylosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8P584
    Conserved Domains (2) summary
    pfam12529
    Location:558 → 738
    Xylo_C; Xylosyltransferase C terminal
    cl27418
    Location:273 → 525
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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