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LOC117345334 uncharacterized LOC117345334 [ Pecten maximus ]

Gene ID: 117345334, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117345334
Gene description
uncharacterized LOC117345334
See related
EnsemblRapid:LOC117345334
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
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Genomic context

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See LOC117345334 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) 16 NC_047030.1 (26210089..26218148, complement)

Chromosome 16 - NC_047030.1Genomic Context describing neighboring genes Neighboring gene DDB1- and CUL4-associated factor 17-like Neighboring gene uncharacterized LOC117344606 Neighboring gene uncharacterized LOC117344608 Neighboring gene carbohydrate sulfotransferase 11-like Neighboring gene protein SCO1 homolog, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047030.1 Chromosome 16 Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC117345334

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NC_047030.1 Reference xPecMax1.1

    Range
    26210089..26218148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033908401.1 → XP_033764292.1  uncharacterized protein LOC117345334

    Related
    XP_033764292.1, XM_033908401.1
    Conserved Domains (1) summary
    cl22970
    Location:171 → 389
    Sulfotransfer_2; Sulfotransferase family

RNA

  1. XR_004536415.1 RNA Sequence

    Related
    XR_004536415.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases