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LOC117341537 beta-1,3-galactosyltransferase 1-like [ Pecten maximus ]

Gene ID: 117341537, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117341537
Gene description
beta-1,3-galactosyltransferase 1-like
See related
EnsemblRapid:LOC117341537
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
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Genomic context

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See LOC117341537 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) 13 NC_047027.1 (5930029..5932362)

Chromosome 13 - NC_047027.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 153-like Neighboring gene protein PXR1-like Neighboring gene beta-1,3-galactosyltransferase 1-like Neighboring gene caffeoyl-CoA O-methyltransferase-like Neighboring gene uncharacterized LOC117340382

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047027.1 Chromosome 13 Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NC_047027.1 Reference xPecMax1.1

    Range
    5930029..5932362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033903408.1 → XP_033759299.1  beta-1,3-galactosyltransferase 1-like

    Related
    XP_033759299.1, XM_033903408.1
    Conserved Domains (1) summary
    cl21608
    Location:157 → 333
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases