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LOC117336609 uncharacterized LOC117336609 [ Pecten maximus ]

Gene ID: 117336609, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117336609
Gene description
uncharacterized LOC117336609
See related
EnsemblRapid:LOC117336609
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
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Genomic context

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See LOC117336609 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) 10 NC_047024.1 (25071242..25072453)

Chromosome 10 - NC_047024.1Genomic Context describing neighboring genes Neighboring gene inactive phospholipase C-like protein 1 Neighboring gene extensin-3-like Neighboring gene HORMA domain-containing protein 1-like Neighboring gene ropporin-1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047024.1 Chromosome 10 Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neuropeptide receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC117336609

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NC_047024.1 Reference xPecMax1.1

    Range
    25071242..25072453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033897221.1 → XP_033753112.1  uncharacterized protein LOC117336609

    Related
    XP_033753112.1, XM_033897221.1
    Conserved Domains (3) summary
    cd00637
    Location:1 → 135
    7tm_classA_rhodopsin-like; rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily
    cd14964
    Location:308 → 337
    7tm_GPCRs; TM helix 6 [structural motif]
    cl28897
    Location:302 → 382
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases