U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117334745 chitin synthase chs-2-like [ Pecten maximus ]

Gene ID: 117334745, updated on 26-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC117334745
Gene description
chitin synthase chs-2-like
See related
EnsemblRapid:LOC117334745
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117334745 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) 9 NC_047023.1 (33378889..33399801, complement)

Chromosome 9 - NC_047023.1Genomic Context describing neighboring genes Neighboring gene heme-binding protein 2-like Neighboring gene dual oxidase 2-like Neighboring gene uncharacterized LOC117334746 Neighboring gene shiftless antiviral inhibitor of ribosomal frameshifting protein homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047023.1 Chromosome 9 Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: chitin synthase chs-2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NC_047023.1 Reference xPecMax1.1

    Range
    33378889..33399801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033894538.1 → XP_033750429.1  LOW QUALITY PROTEIN: chitin synthase chs-2-like

    Related
    XP_033750429.1, XM_033894538.1
    Conserved Domains (2) summary
    cd04190
    Location:852 → 1218
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
    cl22853
    Location:79 → 132
    Motor_domain; Myosin and Kinesin motor domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases