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LOC117327462 beta-1,3-N-acetylglucosaminyltransferase radical fringe-like [ Pecten maximus ]

Gene ID: 117327462, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117327462
Gene description
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
See related
EnsemblRapid:LOC117327462
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
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Genomic context

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See LOC117327462 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) 1 NC_047015.1 (20880809..20923310)

Chromosome 1 - NC_047015.1Genomic Context describing neighboring genes Neighboring gene reticulocyte-binding protein 2-like Neighboring gene syntaxin-8-like Neighboring gene uncharacterized LOC117327471 Neighboring gene uncharacterized LOC117333688 Neighboring gene uncharacterized LOC117326277

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047015.1 Chromosome 1 Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NC_047015.1 Reference xPecMax1.1

    Range
    20880809..20923310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033884467.1 → XP_033740358.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe-like

    Related
    XP_033740358.1, XM_033884467.1
    Conserved Domains (1) summary
    pfam02434
    Location:95 → 333
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

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