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LOC117321202 carbohydrate sulfotransferase 5-like [ Pecten maximus ]

Gene ID: 117321202, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117321202
Gene description
carbohydrate sulfotransferase 5-like
See related
EnsemblRapid:LOC117321202
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
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Genomic context

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See LOC117321202 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) 2 NC_047016.1 (19819371..19825791, complement)

Chromosome 2 - NC_047016.1Genomic Context describing neighboring genes Neighboring gene fas apoptotic inhibitory molecule 1-like Neighboring gene centrosomal protein of 70 kDa-like Neighboring gene uncharacterized LOC117341257 Neighboring gene putative uncharacterized protein DDB_G0286901

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047016.1 Chromosome 2 Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NC_047016.1 Reference xPecMax1.1

    Range
    19819371..19825791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033875671.1 → XP_033731562.1  carbohydrate sulfotransferase 5-like

    Related
    XP_033731562.1, XM_033875671.1
    Conserved Domains (1) summary
    cl21551
    Location:278 → 498
    Sulfotransfer_3; Sulfotransferase family

  2. XM_033875672.1 → XP_033731563.1  carbohydrate sulfotransferase 5-like

    Related
    XP_033731563.1, XM_033875672.1
    Conserved Domains (1) summary
    cl21551
    Location:278 → 498
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
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Molecular Biology Databases