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LOC117320957 carbohydrate sulfotransferase 9-like [ Pecten maximus ]

Gene ID: 117320957, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117320957
Gene description
carbohydrate sulfotransferase 9-like
See related
EnsemblRapid:LOC117320957
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC117320957 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) Unplaced Scaffold NW_022982792.1 (11312..12363, complement)

NW_022982792.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022982792 Unplaced Scaffold Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NW_022982792.1 Reference xPecMax1.1

    Range
    11312..12363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033875443.1 → XP_033731334.1  carbohydrate sulfotransferase 9-like

    Related
    XP_033731334.1, XM_033875443.1
    Conserved Domains (1) summary
    pfam03567
    Location:50 → 216
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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