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LOC117317780 protein Wnt-9a-like [ Pecten maximus ]

Gene ID: 117317780, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117317780
Gene description
protein Wnt-9a-like
See related
EnsemblRapid:LOC117317780
Gene type
protein coding
RefSeq status
MODEL
Organism
Pecten maximus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten
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Genomic context

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See LOC117317780 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
6
Annotation release Status Assembly Chr Location
100 current xPecMax1.1 (GCF_902652985.1) 19 NC_047033.1 (24760439..24818471)

Chromosome 19 - NC_047033.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117317302 Neighboring gene vesicle-fusing ATPase-like Neighboring gene protein Wnt-1-like Neighboring gene uncharacterized LOC117317482

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047033.1 Chromosome 19 Reference xPecMax1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Wnt-9a-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pecten maximus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xPecMax1.1

Genomic

  1. NC_047033.1 Reference xPecMax1.1

    Range
    24760439..24818471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033872709.1 → XP_033728600.1  protein Wnt-9a-like isoform X1

    Related
    XP_033728600.1, XM_033872709.1
    Conserved Domains (1) summary
    cd19341
    Location:81 → 382
    Wnt_Wnt9; Wnt domain found in protein Wnt-9a, Wnt-9b and similar proteins

  2. XM_033872708.1 → XP_033728599.1  protein Wnt-9a-like isoform X1

    Related
    XP_033728599.1, XM_033872708.1
    Conserved Domains (1) summary
    cd19341
    Location:81 → 382
    Wnt_Wnt9; Wnt domain found in protein Wnt-9a, Wnt-9b and similar proteins

  3. XM_033872710.1 → XP_033728601.1  protein Wnt-9a-like isoform X2

    Related
    XP_033728601.1, XM_033872710.1
    Conserved Domains (1) summary
    cd19341
    Location:65 → 366
    Wnt_Wnt9; Wnt domain found in protein Wnt-9a, Wnt-9b and similar proteins
Nucleotide Protein
Heading Accession and Version

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