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LOC117282590 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like [ Cryptotermes secundus ]

Gene ID: 117282590, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117282590
Gene description
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like
See related
EnsemblRapid:LOC117282590
Gene type
protein coding
RefSeq status
MODEL
Organism
Cryptotermes secundus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Kalotermitidae; Cryptotermitinae; Cryptotermes
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Genomic context

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See LOC117282590 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Csec_1.0 (GCF_002891405.2) Unplaced Scaffold NW_019733321.1 (43812..60563)

NW_019733321.1Genomic Context describing neighboring genes Neighboring gene zwei Ig domain protein zig-8-like Neighboring gene UDP-glucuronosyltransferase Neighboring gene uncharacterized LOC111867929

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019733321 Unplaced Scaffold Reference Csec_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cryptotermes secundus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Csec_1.0

Genomic

  1. NW_019733321.1 Reference Csec_1.0

    Range
    43812..60563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033752863.1 → XP_033608754.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like isoform X2

    Related
    XP_033608754.1, XM_033752863.1
    Conserved Domains (1) summary
    cl10013
    Location:9 → 272
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_033752862.1 → XP_033608753.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like isoform X1

    Related
    XP_033608753.1, XM_033752862.1
    Conserved Domains (1) summary
    cl10013
    Location:9 → 294
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

RNA

  1. XR_004513385.1 RNA Sequence

    Related
    XR_004513385.1
Nucleotide Protein
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