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mgat4c mgat4 family member C [ Epinephelus lanceolatus (giant grouper) ]

Gene ID: 117262816, updated on 10-Apr-2024

Summary

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Gene symbol
mgat4c
Gene description
mgat4 family member C
See related
EnsemblRapid:ENSELGG00000000339
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus lanceolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
human zebrafish all
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Genomic context

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See mgat4c in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM528154v1 (GCF_005281545.1) 11 NC_047001.1 (40372536..40563476, complement)

Chromosome 11 - NC_047001.1Genomic Context describing neighboring genes Neighboring gene Ras association domain family member 9 Neighboring gene neurotensin Neighboring gene small nucleolar RNA SNORD97 Neighboring gene eukaryotic translation initiation factor 4, gamma 2b Neighboring gene lymphatic vessel endothelial hyaluronic receptor 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047001.1 Chromosome 11 Reference ASM528154v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus lanceolatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM528154v1 Primary Assembly

Genomic

  1. NC_047001.1 Reference ASM528154v1 Primary Assembly

    Range
    40372536..40563476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033635964.1 → XP_033491855.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Related
    ENSELGP00000000604.1, ENSELGT00000000642.1
    Conserved Domains (1) summary
    pfam04666
    Location:63 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_033635965.1 → XP_033491856.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Related
    ENSELGP00000000603.1, ENSELGT00000000640.1
    Conserved Domains (1) summary
    pfam04666
    Location:63 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  3. XM_033635966.1 → XP_033491857.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Conserved Domains (1) summary
    pfam04666
    Location:63 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  4. XM_033635967.1 → XP_033491858.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Conserved Domains (1) summary
    pfam04666
    Location:63 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

RNA

  1. XR_004502131.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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