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chst6 carbohydrate sulfotransferase 6 [ Epinephelus lanceolatus (giant grouper) ]

Gene ID: 117262768, updated on 10-Apr-2024

Summary

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Gene symbol
chst6
Gene description
carbohydrate sulfotransferase 6
See related
EnsemblRapid:ENSELGG00000002098
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus lanceolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
zebrafish all
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Genomic context

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See chst6 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM528154v1 (GCF_005281545.1) 11 NC_047001.1 (14600924..14623196, complement)

Chromosome 11 - NC_047001.1Genomic Context describing neighboring genes Neighboring gene syntrophin, beta 2 Neighboring gene spire-type actin nucleation factor 2 Neighboring gene transmembrane protein 231 Neighboring gene GABA(A) receptor-associated protein like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047001.1 Chromosome 11 Reference ASM528154v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus lanceolatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM528154v1 Primary Assembly

Genomic

  1. NC_047001.1 Reference ASM528154v1 Primary Assembly

    Range
    14600924..14623196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033635892.1 → XP_033491783.1  carbohydrate sulfotransferase 6

    Related
    ENSELGP00000004249.1, ENSELGT00000004393.1
    Conserved Domains (1) summary
    pfam13469
    Location:45 → 297
    Sulfotransfer_3; Sulfotransferase family

  2. XM_033635891.1 → XP_033491782.1  carbohydrate sulfotransferase 6

    Related
    ENSELGP00000004247.1, ENSELGT00000004390.1
    Conserved Domains (1) summary
    pfam13469
    Location:45 → 297
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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