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zgc:154054 uncharacterized LOC117261473 [ Epinephelus lanceolatus (giant grouper) ]

Gene ID: 117261473, updated on 10-Apr-2024

Summary

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Gene symbol
zgc:154054
Gene description
uncharacterized LOC117261473
See related
EnsemblRapid:ENSELGG00000013375
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus lanceolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
zebrafish all
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Genomic context

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See zgc:154054 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM528154v1 (GCF_005281545.1) 10 NC_047000.1 (11370220..11414224)

Chromosome 10 - NC_047000.1Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 17b Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene U6 spliceosomal RNA Neighboring gene short coiled-coil protein B Neighboring gene microsomal glutathione S-transferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047000.1 Chromosome 10 Reference ASM528154v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus lanceolatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM528154v1 Primary Assembly

Genomic

  1. NC_047000.1 Reference ASM528154v1 Primary Assembly

    Range
    11370220..11414224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033633882.1 → XP_033489773.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B

    Related
    ENSELGP00000028652.1, ENSELGT00000030438.1
    Conserved Domains (1) summary
    pfam04666
    Location:105 → 380
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
Heading Accession and Version

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