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si:dkey-121b10.7 heparan sulfate glucosamine 3-O-sulfotransferase 6 [ Epinephelus lanceolatus (giant grouper) ]

Gene ID: 117246656, updated on 19-Mar-2024

Summary

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Gene symbol
si:dkey-121b10.7
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus lanceolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
zebrafish all
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Genomic context

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See si:dkey-121b10.7 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM528154v1 (GCF_005281545.1) 21 NC_047011.1 (15230846..15259263, complement)

Chromosome 21 - NC_047011.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117246637 Neighboring gene meiosis-specific with OB domain-containing protein-like Neighboring gene uncharacterized LOC117247620 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047011.1 Chromosome 21 Reference ASM528154v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus lanceolatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM528154v1 Primary Assembly

Genomic

  1. NC_047011.1 Reference ASM528154v1 Primary Assembly

    Range
    15230846..15259263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033610542.1 → XP_033466433.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    Conserved Domains (1) summary
    pfam00685
    Location:130 → 366
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases