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Tps1 Trehalose-6-phosphate synthase 1 [ Bombus vosnesenskii ]

Gene ID: 117234349, updated on 10-Oct-2024

Summary

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Gene symbol
Tps1
Gene description
Trehalose-6-phosphate synthase 1
See related
EnsemblRapid:ENSBVOG00000007354
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus vosnesenskii
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See Tps1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Bvos_JDL3184-5_v1.1 (GCF_011952255.1) Unplaced Scaffold NW_022882953.1 (2574345..2614121, complement)

NW_022882953.1Genomic Context describing neighboring genes Neighboring gene Goosecoid Neighboring gene uncharacterized LOC117234359 Neighboring gene uncharacterized LOC117234358 Neighboring gene uncharacterized LOC117234357 Neighboring gene uncharacterized LOC117234356 Neighboring gene E3 ubiquitin-protein ligase TRAIP-like Neighboring gene poly(U)-specific endoribonuclease homolog Neighboring gene zinc finger MYND-type containing 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022882953 Unplaced Scaffold Reference Bvos_JDL3184-5_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Names
alpha,alpha-trehalose-phosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus vosnesenskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bvos_JDL3184-5_v1.1

Genomic

  1. NW_022882953.1 Reference Bvos_JDL3184-5_v1.1

    Range
    2574345..2614121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033495459.1 → XP_033351350.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] isoform X3

    UniProtKB/TrEMBL
    A0A6J3KES0
    Conserved Domains (1) summary
    PRK14501
    Location:15 → 763
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

  2. XM_033495457.1 → XP_033351348.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] isoform X1

    UniProtKB/TrEMBL
    A0A6J3KDU9
    Conserved Domains (1) summary
    PRK14501
    Location:27 → 775
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

  3. XM_033495458.1 → XP_033351349.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] isoform X2

    UniProtKB/TrEMBL
    A0A6J3KHF5
    Related
    ENSBVOP00000011990.1, ENSBVOT00000015089.1
    Conserved Domains (1) summary
    PRK14501
    Location:27 → 772
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Nucleotide Protein
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