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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Megalopta genalis ]

Gene ID: 117226333, updated on 10-Oct-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Megalopta genalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Halictidae; Halictinae; Augochlorini; Megalopta
Orthologs
fruit fly honey bee all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current USU_MGEN_1.2 (GCF_011865705.1) Unplaced Scaffold NW_022890562.1 (379778..384540)

NW_022890562.1Genomic Context describing neighboring genes Neighboring gene protein Fer3-like Neighboring gene uncharacterized LOC117226231 Neighboring gene Crk proto-oncogene, adaptor protein Neighboring gene carboxypeptidase N subunit 2-like Neighboring gene mannose-1-phosphate guanyltransferase alpha-A-like Neighboring gene mannose-1-phosphate guanyltransferase alpha-A-like Neighboring gene uncharacterized LOC117226322

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022890562 Unplaced Scaffold Reference USU_MGEN_1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developmental Transcriptome for a Facultatively Eusocial Bee, Megalopta genalis. Jones BM, et al. G3 (Bethesda), 2015 Aug 14. PMID 26276382, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
congested-like trachea protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megalopta genalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USU_MGEN_1.2

Genomic

  1. NW_022890562.1 Reference USU_MGEN_1.2

    Range
    379778..384540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033480568.1 → XP_033336459.1  congested-like trachea protein isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:103 → 197
    Mito_carr; Mitochondrial carrier protein

  2. XM_033480569.1 → XP_033336460.1  congested-like trachea protein isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:66 → 160
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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