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Sin3A SIN3 transcription regulator family member A [ Bombus bifarius ]

Gene ID: 117216595, updated on 10-Oct-2024

Summary

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Gene symbol
Sin3A
Gene description
SIN3 transcription regulator family member A
See related
EnsemblRapid:ENSBBSG00000019961
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus bifarius
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See Sin3A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Bbif_JDL3187 (GCF_011952205.1) Unplaced Scaffold NW_022885586.1 (6969990..6989048)

NW_022885586.1Genomic Context describing neighboring genes Neighboring gene neprilysin-4-like Neighboring gene Segment polarity protein dishevelled Neighboring gene mitochondrial tRNA-specific 2-thiouridylase 1 Neighboring gene uncharacterized LOC117216604 Neighboring gene Centaurin beta 1A Neighboring gene COP9 signalosome subunit 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022885586 Unplaced Scaffold Reference Bbif_JDL3187

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired amphipathic helix protein Sin3a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus bifarius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bbif_JDL3187

Genomic

  1. NW_022885586.1 Reference Bbif_JDL3187

    Range
    6969990..6989048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033463418.1 → XP_033319309.1  paired amphipathic helix protein Sin3a isoform X2

    UniProtKB/TrEMBL
    A0A6P8NGR7
    Conserved Domains (1) summary
    COG5602
    Location:124 → 1292
    Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]

  2. XM_033463416.1 → XP_033319307.1  paired amphipathic helix protein Sin3a isoform X1

    UniProtKB/TrEMBL
    A0A6P8NZD6
    Related
    ENSBBSP00000032119.1, ENSBBST00000000695.1
    Conserved Domains (1) summary
    COG5602
    Location:124 → 1292
    Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]
Nucleotide Protein
Heading Accession and Version

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