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LOC117213056 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial [ Bombus bifarius ]

Gene ID: 117213056, updated on 10-Oct-2024

Summary

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Gene symbol
LOC117213056
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial
See related
EnsemblRapid:ENSBBSG00000004684
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus bifarius
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See LOC117213056 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Bbif_JDL3187 (GCF_011952205.1) Unplaced Scaffold NW_022884681.1 (138026..139508)

NW_022884681.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase PAK mbt Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene Regulator of cullins 2 Neighboring gene Trehalose transporter 1-1 Neighboring gene clavesin-2 Neighboring gene rhophilin Neighboring gene touch insensitive larva B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022884681 Unplaced Scaffold Reference Bbif_JDL3187

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus bifarius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bbif_JDL3187

Genomic

  1. NW_022884681.1 Reference Bbif_JDL3187

    Range
    138026..139508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033458288.1 → XP_033314179.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P8N0A8
    Related
    ENSBBSP00000005275.1, ENSBBST00000014060.1
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 274
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_033458287.1 → XP_033314178.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P8N0I0
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 237
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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