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LOC117212917 O-glucosyltransferase rumi homolog [ Bombus bifarius ]

Gene ID: 117212917, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117212917
Gene description
O-glucosyltransferase rumi homolog
See related
EnsemblRapid:ENSBBSG00000012323
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus bifarius
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
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Genomic context

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See LOC117212917 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Bbif_JDL3187 (GCF_011952205.1) Unplaced Scaffold NW_022884649.1 (229586..231264, complement)

NW_022884649.1Genomic Context describing neighboring genes Neighboring gene Matrix metalloproteinase 1 Neighboring gene uncharacterized LOC117212918 Neighboring gene uncharacterized LOC117212919 Neighboring gene ribosomal protein L30 Neighboring gene mannose phosphate isomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022884649 Unplaced Scaffold Reference Bbif_JDL3187

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus bifarius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bbif_JDL3187

Genomic

  1. NW_022884649.1 Reference Bbif_JDL3187

    Range
    229586..231264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033458061.1 → XP_033313952.1  O-glucosyltransferase rumi homolog

    UniProtKB/TrEMBL
    A0A6P8NHC0
    Related
    ENSBBSP00000017226.1, ENSBBST00000029385.1
    Conserved Domains (1) summary
    cl23835
    Location:67 → 402
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
Heading Accession and Version

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