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LOC117207865 mitochondrial basic amino acids transporter-like [ Bombus bifarius ]

Gene ID: 117207865, updated on 1-Oct-2024

Summary

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Gene symbol
LOC117207865
Gene description
mitochondrial basic amino acids transporter-like
See related
EnsemblRapid:ENSBBSG00000015889
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus bifarius
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
honey bee all
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Genomic context

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See LOC117207865 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bbif_JDL3187 (GCF_011952205.1) Unplaced Scaffold NW_022884413.1 (2353286..2355640, complement)

NW_022884413.1Genomic Context describing neighboring genes Neighboring gene VPS54 subunit of GARP complex scat Neighboring gene kelch-like protein 10 Neighboring gene uncharacterized LOC117207866 Neighboring gene phenylalanine-4-hydroxylase Neighboring gene circadian locomoter output cycles kaput protein Clock

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022884413 Unplaced Scaffold Reference Bbif_JDL3187

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus bifarius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bbif_JDL3187

Genomic

  1. NW_022884413.1 Reference Bbif_JDL3187

    Range
    2353286..2355640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033448519.1 → XP_033304410.1  mitochondrial basic amino acids transporter-like isoform X1

    UniProtKB/TrEMBL
    A0A6P8MPK4
    Related
    ENSBBSP00000022838.1, ENSBBST00000036438.1
    Conserved Domains (1) summary
    pfam00153
    Location:182 → 260
    Mito_carr; Mitochondrial carrier protein

  2. XM_033448520.1 → XP_033304411.1  mitochondrial basic amino acids transporter-like isoform X2

    UniProtKB/TrEMBL
    A0A6P8LTX0
    Conserved Domains (1) summary
    pfam00153
    Location:121 → 199
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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