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LOC117206998 proton-coupled amino acid transporter-like protein CG1139 [ Bombus bifarius ]

Gene ID: 117206998, updated on 1-Oct-2024

Summary

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Gene symbol
LOC117206998
Gene description
proton-coupled amino acid transporter-like protein CG1139
See related
EnsemblRapid:ENSBBSG00000017166
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus bifarius
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
honey bee all
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Genomic context

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See LOC117206998 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Bbif_JDL3187 (GCF_011952205.1) Unplaced Scaffold NW_022884390.1 (1402987..1424590)

NW_022884390.1Genomic Context describing neighboring genes Neighboring gene lysophospholipase D GDPD1-like Neighboring gene proton-coupled amino acid transporter-like protein CG1139 Neighboring gene uncharacterized LOC117207008 Neighboring gene SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 Neighboring gene uncharacterized LOC117207006 Neighboring gene LIM homeobox transcription factor 1 alpha Neighboring gene BTB-protein-VII

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022884390 Unplaced Scaffold Reference Bbif_JDL3187

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proton-coupled amino acid transporter-like protein CG1139

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus bifarius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bbif_JDL3187

Genomic

  1. NW_022884390.1 Reference Bbif_JDL3187

    Range
    1402987..1424590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033446781.1 → XP_033302672.1  proton-coupled amino acid transporter-like protein CG1139

    UniProtKB/TrEMBL
    A0A6P8MKZ9
    Related
    ENSBBSP00000025211.1, ENSBBST00000039180.1
    Conserved Domains (1) summary
    cl00456
    Location:58 → 460
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_033446780.1 → XP_033302671.1  proton-coupled amino acid transporter-like protein CG1139

    UniProtKB/TrEMBL
    A0A6P8MKZ9
    Related
    ENSBBSP00000025212.1, ENSBBST00000039181.1
    Conserved Domains (1) summary
    cl00456
    Location:58 → 460
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version

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