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LOC117206924 beta-1,3-galactosyltransferase 5 [ Bombus bifarius ]

Gene ID: 117206924, updated on 10-Oct-2024

Summary

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Gene symbol
LOC117206924
Gene description
beta-1,3-galactosyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus bifarius
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See LOC117206924 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Bbif_JDL3187 (GCF_011952205.1) Unplaced Scaffold NW_022884390.1 (1496522..1506486, complement)

NW_022884390.1Genomic Context describing neighboring genes Neighboring gene LIM homeobox transcription factor 1 alpha Neighboring gene BTB-protein-VII Neighboring gene uncharacterized LOC117206926 Neighboring gene uncharacterized LOC117206925 Neighboring gene ras-responsive element-binding protein 1 Neighboring gene sirtuin 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022884390 Unplaced Scaffold Reference Bbif_JDL3187

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus bifarius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bbif_JDL3187

Genomic

  1. NW_022884390.1 Reference Bbif_JDL3187

    Range
    1496522..1506486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033446630.1 → XP_033302521.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A6P8M3W0
    Conserved Domains (1) summary
    cl21608
    Location:117 → 303
    Galactosyl_T; Galactosyltransferase

  2. XM_033446629.1 → XP_033302520.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A6P8M3W0
    Conserved Domains (1) summary
    cl21608
    Location:117 → 303
    Galactosyl_T; Galactosyltransferase

  3. XM_033446627.1 → XP_033302518.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A6P8M3W0
    Conserved Domains (1) summary
    cl21608
    Location:117 → 303
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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