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Scgdelta sarcoglycan delta [ Bombus vancouverensis nearcticus ]

Gene ID: 117157655, updated on 10-Oct-2024

Summary

Gene symbol
Scgdelta
Gene description
sarcoglycan delta
See related
EnsemblRapid:ENSBVNG00000015674
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus vancouverensis nearcticus (sub-species: nearcticus)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus; Bombus vancouverensis
Orthologs
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Genomic context

See Scgdelta in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Bvanc_JDL1245 (GCF_011952275.1) Unplaced Scaffold NW_022881831.1 (1380301..1593031, complement)

NW_022881831.1Genomic Context describing neighboring genes Neighboring gene protein Cep78 homolog Neighboring gene phosphodiesterase 8 Neighboring gene uncharacterized LOC117157656 Neighboring gene putative uncharacterized protein DDB_G0277057 Neighboring gene Down syndrome cell adhesion molecule-like protein Dscam2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_022881831 Unplaced Scaffold Reference Bvanc_JDL1245

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus vancouverensis nearcticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bvanc_JDL1245

Genomic

  1. NW_022881831.1 Reference Bvanc_JDL1245

    Range
    1380301..1593031 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033335857.1XP_033191748.1  zeta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:130401
    Sarcoglycan_1; Sarcoglycan complex subunit protein
  2. XM_033335856.1XP_033191747.1  zeta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:130401
    Sarcoglycan_1; Sarcoglycan complex subunit protein
  3. XM_033335860.1XP_033191751.1  zeta-sarcoglycan isoform X4

    Conserved Domains (1) summary
    pfam04790
    Location:51322
    Sarcoglycan_1; Sarcoglycan complex subunit protein
  4. XM_033335858.1XP_033191749.1  zeta-sarcoglycan isoform X2

    Related
    ENSBVNP00000022845.1, ENSBVNT00000036095.1
    Conserved Domains (1) summary
    pfam04790
    Location:89360
    Sarcoglycan_1; Sarcoglycan complex subunit protein
  5. XM_033335859.1XP_033191750.1  zeta-sarcoglycan isoform X3

    Related
    ENSBVNP00000022844.1, ENSBVNT00000036103.1
    Conserved Domains (1) summary
    pfam04790
    Location:89360
    Sarcoglycan_1; Sarcoglycan complex subunit protein
  6. XM_033335862.1XP_033191753.1  zeta-sarcoglycan isoform X4

    Conserved Domains (1) summary
    pfam04790
    Location:51322
    Sarcoglycan_1; Sarcoglycan complex subunit protein
  7. XM_033335861.1XP_033191752.1  zeta-sarcoglycan isoform X4

    Conserved Domains (1) summary
    pfam04790
    Location:51322
    Sarcoglycan_1; Sarcoglycan complex subunit protein