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wb wing blister [ Bombus vancouverensis nearcticus ]

Gene ID: 117155972, updated on 10-Oct-2024

Summary

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Gene symbol
wb
Gene description
wing blister
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus vancouverensis nearcticus (sub-species: nearcticus)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus; Bombus vancouverensis
Orthologs
fruit fly honey bee all
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Genomic context

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Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
100 current Bvanc_JDL1245 (GCF_011952275.1) Unplaced Scaffold NW_022881782.1 (1202890..1404435, complement)

NW_022881782.1Genomic Context describing neighboring genes Neighboring gene glass bottom boat Neighboring gene calmodulin-regulated spectrin-associated protein patronin Neighboring gene uncharacterized LOC117155988 Neighboring gene uncharacterized LOC117155985 Neighboring gene lipase member H-like Neighboring gene lost and found

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022881782 Unplaced Scaffold Reference Bvanc_JDL1245

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1; laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus vancouverensis nearcticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bvanc_JDL1245

Genomic

  1. NW_022881782.1 Reference Bvanc_JDL1245

    Range
    1202890..1404435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033332526.1 → XP_033188417.1  laminin subunit alpha-2 isoform X1

    Conserved Domains (8) summary
    smart00282
    Location:3086 → 3214
    LamG; Laminin G domain
    COG1511
    Location:1957 → 2430
    YhgE; Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]
    cd00055
    Location:1815 → 1849
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3238 → 3395
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam12785
    Location:1792 → 1911
    VESA1_N; Variant erythrocyte surface antigen-1
    pfam00052
    Location:1536 → 1671
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1210 → 1261
    Laminin_EGF; Laminin EGF domain
    cl22861
    Location:2473 → 2611
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  2. XM_033332528.1 → XP_033188419.1  laminin subunit alpha-1 isoform X3

    Conserved Domains (9) summary
    smart00180
    Location:889 → 933
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2812 → 2940
    LamG; Laminin G domain
    cd00055
    Location:685 → 733
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2964 → 3121
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    PTZ00440
    Location:1624 → 2132
    PTZ00440; reticulocyte binding protein 2-like protein; Provisional
    pfam00052
    Location:1262 → 1397
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:936 → 987
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:58 → 283
    Laminin_N; Laminin N-terminal (Domain VI)
    cl22861
    Location:2199 → 2337
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  3. XM_033332527.1 → XP_033188418.1  laminin subunit alpha-1 isoform X2

    Conserved Domains (9) summary
    smart00180
    Location:968 → 1012
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2891 → 3019
    LamG; Laminin G domain
    cd00055
    Location:764 → 812
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3043 → 3200
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    PTZ00440
    Location:1703 → 2211
    PTZ00440; reticulocyte binding protein 2-like protein; Provisional
    pfam00052
    Location:1341 → 1476
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1015 → 1066
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:58 → 283
    Laminin_N; Laminin N-terminal (Domain VI)
    cl22861
    Location:2278 → 2416
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  4. XM_033332530.1 → XP_033188421.1  laminin subunit alpha-1 isoform X5

    Conserved Domains (8) summary
    smart00180
    Location:505 → 549
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2428 → 2556
    LamG; Laminin G domain
    cd00055
    Location:301 → 349
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2580 → 2737
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    PTZ00440
    Location:1240 → 1748
    PTZ00440; reticulocyte binding protein 2-like protein; Provisional
    pfam00052
    Location:878 → 1013
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:552 → 603
    Laminin_EGF; Laminin EGF domain
    cl22861
    Location:1815 → 1953
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  5. XM_033332529.1 → XP_033188420.1  laminin subunit alpha-2 isoform X4

    Conserved Domains (8) summary
    smart00282
    Location:2666 → 2794
    LamG; Laminin G domain
    COG1511
    Location:1537 → 2010
    YhgE; Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]
    cd00055
    Location:1395 → 1429
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2818 → 2975
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam12785
    Location:1372 → 1491
    VESA1_N; Variant erythrocyte surface antigen-1
    pfam00052
    Location:1116 → 1251
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:790 → 841
    Laminin_EGF; Laminin EGF domain
    cl22861
    Location:2053 → 2191
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
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