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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Bombus vancouverensis nearcticus ]

Gene ID: 117155225, updated on 10-Oct-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
See related
EnsemblRapid:ENSBVNG00000018909
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus vancouverensis nearcticus (sub-species: nearcticus)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus; Bombus vancouverensis
Orthologs
fruit fly honey bee all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Bvanc_JDL1245 (GCF_011952275.1) Unplaced Scaffold NW_022881777.1 (1313676..1318994)

NW_022881777.1Genomic Context describing neighboring genes Neighboring gene Crk proto-oncogene, adaptor protein Neighboring gene AMP-activated protein kinase alpha subunit Neighboring gene insulin-like growth factor-binding protein complex acid labile subunit Neighboring gene GDP-mannose pyrophosphorylase A Neighboring gene uncharacterized LOC117155218

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022881777 Unplaced Scaffold Reference Bvanc_JDL1245

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
congested-like trachea protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus vancouverensis nearcticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bvanc_JDL1245

Genomic

  1. NW_022881777.1 Reference Bvanc_JDL1245

    Range
    1313676..1318994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033330964.1 → XP_033186855.1  congested-like trachea protein isoform X1

    Related
    ENSBVNP00000029570.1, ENSBVNT00000003979.1
    Conserved Domains (1) summary
    pfam00153
    Location:105 → 196
    Mito_carr; Mitochondrial carrier protein

  2. XM_033330965.1 → XP_033186856.1  congested-like trachea protein isoform X2

    Related
    ENSBVNP00000029569.1, ENSBVNT00000003984.1
    Conserved Domains (1) summary
    pfam00153
    Location:67 → 158
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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