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LOC117114627 alpha-(1,3)-fucosyltransferase 10-like [ Anneissia japonica ]

Gene ID: 117114627, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117114627
Gene description
alpha-(1,3)-fucosyltransferase 10-like
See related
EnsemblRapid:LOC117114627
Gene type
protein coding
RefSeq status
MODEL
Organism
Anneissia japonica
Lineage
Eukaryota; Metazoa; Echinodermata; Pelmatozoa; Crinoidea; Articulata; Comatulida; Comatulidae; Comatulinae; Anneissia
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Genomic context

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See LOC117114627 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1163010v1 (GCF_011630105.1) Unplaced Scaffold NW_022729021.1 (64878..68372)

NW_022729021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117114572 Neighboring gene ovoinhibitor-like Neighboring gene U4/U6.U5 tri-snRNP-associated protein 2-like Neighboring gene poly(ADP-ribose) glycohydrolase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022729021 Unplaced Scaffold Reference ASM1163010v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 10-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anneissia japonica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1163010v1

Genomic

  1. NW_022729021.1 Reference ASM1163010v1

    Range
    64878..68372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033258317.1 → XP_033114208.1  alpha-(1,3)-fucosyltransferase 10-like isoform X1

    Related
    XP_033114208.1, XM_033258317.1
    Conserved Domains (2) summary
    pfam00852
    Location:192 → 394
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:70 → 166
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_033258318.1 → XP_033114209.1  alpha-(1,3)-fucosyltransferase 10-like isoform X2

    Related
    XP_033114209.1, XM_033258318.1
    Conserved Domains (2) summary
    pfam00852
    Location:157 → 359
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:35 → 131
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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