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LOC117114517 GPI mannosyltransferase 1-like [ Anneissia japonica ]

Gene ID: 117114517, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117114517
Gene description
GPI mannosyltransferase 1-like
See related
EnsemblRapid:LOC117114517
Gene type
protein coding
RefSeq status
MODEL
Organism
Anneissia japonica
Lineage
Eukaryota; Metazoa; Echinodermata; Pelmatozoa; Crinoidea; Articulata; Comatulida; Comatulidae; Comatulinae; Anneissia
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Genomic context

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See LOC117114517 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1163010v1 (GCF_011630105.1) Unplaced Scaffold NW_022728715.1 (263938..270798, complement)

NW_022728715.1Genomic Context describing neighboring genes Neighboring gene dihydroceramide fatty acyl 2-hydroxylase FAH2-like Neighboring gene uncharacterized LOC117114512 Neighboring gene ATP-binding cassette sub-family A member 3-like Neighboring gene ATP-binding cassette sub-family A member 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022728715 Unplaced Scaffold Reference ASM1163010v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anneissia japonica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1163010v1

Genomic

  1. NW_022728715.1 Reference ASM1163010v1

    Range
    263938..270798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033258193.1 → XP_033114084.1  GPI mannosyltransferase 1-like

    Related
    XP_033114084.1, XM_033258193.1
    Conserved Domains (1) summary
    cl21590
    Location:8 → 380
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_033258194.1 → XP_033114085.1  GPI mannosyltransferase 1-like

    Related
    XP_033114085.1, XM_033258194.1
    Conserved Domains (1) summary
    cl21590
    Location:8 → 380
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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