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LOC117107829 EGF domain-specific O-linked N-acetylglucosamine transferase-like [ Anneissia japonica ]

Gene ID: 117107829, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117107829
Gene description
EGF domain-specific O-linked N-acetylglucosamine transferase-like
See related
EnsemblRapid:LOC117107829
Gene type
protein coding
RefSeq status
MODEL
Organism
Anneissia japonica
Lineage
Eukaryota; Metazoa; Echinodermata; Pelmatozoa; Crinoidea; Articulata; Comatulida; Comatulidae; Comatulinae; Anneissia
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Genomic context

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See LOC117107829 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM1163010v1 (GCF_011630105.1) Unplaced Scaffold NW_022712472.1 (108245..124314)

NW_022712472.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117107827 Neighboring gene protein disulfide isomerase Creld2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022712472 Unplaced Scaffold Reference ASM1163010v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anneissia japonica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1163010v1

Genomic

  1. NW_022712472.1 Reference ASM1163010v1

    Range
    108245..124314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033249618.1 → XP_033105509.1  EGF domain-specific O-linked N-acetylglucosamine transferase-like

    Related
    XP_033105509.1, XM_033249618.1
    Conserved Domains (1) summary
    pfam04577
    Location:315 → 460
    DUF563; Protein of unknown function (DUF563)

  2. XM_033249619.1 → XP_033105510.1  EGF domain-specific O-linked N-acetylglucosamine transferase-like

    Related
    XP_033105510.1, XM_033249619.1
    Conserved Domains (1) summary
    pfam04577
    Location:315 → 460
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

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