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LOC117106263 GDP-fucose protein O-fucosyltransferase 1-like [ Anneissia japonica ]

Gene ID: 117106263, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117106263
Gene description
GDP-fucose protein O-fucosyltransferase 1-like
See related
EnsemblRapid:LOC117106263
Gene type
protein coding
RefSeq status
MODEL
Organism
Anneissia japonica
Lineage
Eukaryota; Metazoa; Echinodermata; Pelmatozoa; Crinoidea; Articulata; Comatulida; Comatulidae; Comatulinae; Anneissia
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Genomic context

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See LOC117106263 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM1163010v1 (GCF_011630105.1) Unplaced Scaffold NW_022706987.1 (288305..301759, complement)

NW_022706987.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117106254 Neighboring gene 4-trimethylaminobutyraldehyde dehydrogenase A-like Neighboring gene acyl-CoA dehydrogenase family member 11-like Neighboring gene breast cancer anti-estrogen resistance protein 3-like Neighboring gene uncharacterized LOC117106257

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022706987 Unplaced Scaffold Reference ASM1163010v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anneissia japonica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1163010v1

Genomic

  1. NW_022706987.1 Reference ASM1163010v1

    Range
    288305..301759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033247624.1 → XP_033103515.1  GDP-fucose protein O-fucosyltransferase 1-like

    Related
    XP_033103515.1, XM_033247624.1
    Conserved Domains (1) summary
    cd11302
    Location:33 → 376
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
Nucleotide Protein
Heading Accession and Version

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