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CNTFR ciliary neurotrophic factor receptor [ Trachypithecus francoisi (Francois's langur) ]

Gene ID: 117099045, updated on 19-Mar-2024

Summary

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Gene symbol
CNTFR
Gene description
ciliary neurotrophic factor receptor
See related
EnsemblRapid:ENSTFRG00000007406
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachypithecus francoisi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
Orthologs
human mouse all
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Genomic context

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See CNTFR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681461.1 (93154884..93193714)

NW_022681461.1Genomic Context describing neighboring genes Neighboring gene dynactin subunit 3 Neighboring gene ribonuclease P/MRP subunit p25 like Neighboring gene energy homeostasis associated Neighboring gene dynein axonemal intermediate chain 1 Neighboring gene family with sequence similarity 219 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022681461 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ciliary neurotrophic factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CNTFR-CLCF1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ciliary neurotrophic factor receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ciliary neurotrophic factor receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tfra_2.0 Primary Assembly

Genomic

  1. NW_022681461.1 Reference Tfra_2.0 Primary Assembly

    Range
    93154884..93193714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033238247.1 → XP_033094138.1  ciliary neurotrophic factor receptor subunit alpha isoform X1

    Conserved Domains (3) summary
    smart00408
    Location:115 → 172
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:280 → 376
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:115 → 123
    Ig; Ig strand B [structural motif]

  2. XM_033238248.1 → XP_033094139.1  ciliary neurotrophic factor receptor subunit alpha isoform X2

    Conserved Domains (3) summary
    smart00408
    Location:115 → 172
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:280 → 376
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:115 → 123
    Ig; Ig strand B [structural motif]

  3. XM_033238251.1 → XP_033094142.1  ciliary neurotrophic factor receptor subunit alpha isoform X5

    Related
    ENSTFRP00000008668.1, ENSTFRT00000010841.1
    Conserved Domains (3) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:39 → 47
    Ig; Ig strand B [structural motif]

  4. XM_033238246.1 → XP_033094137.1  ciliary neurotrophic factor receptor subunit alpha isoform X1

    Conserved Domains (3) summary
    smart00408
    Location:115 → 172
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:280 → 376
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:115 → 123
    Ig; Ig strand B [structural motif]

  5. XM_033238250.1 → XP_033094141.1  ciliary neurotrophic factor receptor subunit alpha isoform X4

    Conserved Domains (3) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:39 → 47
    Ig; Ig strand B [structural motif]

  6. XM_033238249.1 → XP_033094140.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    Conserved Domains (3) summary
    smart00408
    Location:83 → 140
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:248 → 344
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:83 → 91
    Ig; Ig strand B [structural motif]
Nucleotide Protein
Heading Accession and Version

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