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TRAPPC10 trafficking protein particle complex subunit 10 [ Trachypithecus francoisi (Francois's langur) ]

Gene ID: 117092967, updated on 19-Mar-2024

Summary

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Gene symbol
TRAPPC10
Gene description
trafficking protein particle complex subunit 10
See related
EnsemblRapid:ENSTFRG00000000011
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachypithecus francoisi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
Orthologs
human mouse all
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Genomic context

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See TRAPPC10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022680471.1 (138838..238735)

NW_022680471.1Genomic Context describing neighboring genes Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 3 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC117093385 Neighboring gene PWP2 small subunit processome component Neighboring gene glutamine amidotransferase class 1 domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022680471 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPPII protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 10
Names
trafficking protein particle complex 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tfra_2.0 Primary Assembly

Genomic

  1. NW_022680471.1 Reference Tfra_2.0 Primary Assembly

    Range
    138838..238735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033227677.1 → XP_033083568.1  trafficking protein particle complex subunit 10 isoform X4

    Conserved Domains (1) summary
    pfam12584
    Location:1020 → 1197
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  2. XM_033227942.1 → XP_033083833.1  trafficking protein particle complex subunit 10 isoform X7

    Conserved Domains (1) summary
    pfam12584
    Location:921 → 1098
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  3. XM_033227410.1 → XP_033083301.1  trafficking protein particle complex subunit 10 isoform X1

    Related
    ENSTFRP00000000005.1, ENSTFRT00000000011.1
    Conserved Domains (1) summary
    pfam12584
    Location:1069 → 1246
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  4. XM_033227764.1 → XP_033083655.1  trafficking protein particle complex subunit 10 isoform X5

    Conserved Domains (1) summary
    pfam12584
    Location:977 → 1154
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  5. XM_033227589.1 → XP_033083480.1  trafficking protein particle complex subunit 10 isoform X3

    Conserved Domains (1) summary
    pfam12584
    Location:1024 → 1201
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  6. XM_033227502.1 → XP_033083393.1  trafficking protein particle complex subunit 10 isoform X2

    Conserved Domains (1) summary
    pfam12584
    Location:1029 → 1206
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  7. XM_033228030.1 → XP_033083921.1  trafficking protein particle complex subunit 10 isoform X6

    Conserved Domains (1) summary
    pfam12584
    Location:878 → 1055
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  8. XM_033228113.1 → XP_033084004.1  trafficking protein particle complex subunit 10 isoform X8

    Conserved Domains (1) summary
    pfam12584
    Location:835 → 1012
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  9. XM_033228282.1 → XP_033084173.1  trafficking protein particle complex subunit 10 isoform X9

    Conserved Domains (1) summary
    pfam12584
    Location:741 → 918
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  10. XM_033227853.1 → XP_033083744.1  trafficking protein particle complex subunit 10 isoform X6

    Conserved Domains (1) summary
    pfam12584
    Location:878 → 1055
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  11. XM_033228212.1 → XP_033084103.1  trafficking protein particle complex subunit 10 isoform X9

    Conserved Domains (1) summary
    pfam12584
    Location:741 → 918
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  12. XM_033228459.1 → XP_033084350.1  trafficking protein particle complex subunit 10 isoform X9

    Conserved Domains (1) summary
    pfam12584
    Location:741 → 918
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  13. XM_033228369.1 → XP_033084260.1  trafficking protein particle complex subunit 10 isoform X9

    Conserved Domains (1) summary
    pfam12584
    Location:741 → 918
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10
Nucleotide Protein
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