U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CACYBP calcyclin binding protein [ Trachypithecus francoisi (Francois's langur) ]

Gene ID: 117075897, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CACYBP
Gene description
calcyclin binding protein
See related
EnsemblRapid:ENSTFRG00000022901
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachypithecus francoisi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CACYBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681470.1 (31735411..31747945)

NW_022681470.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 like Neighboring gene barrier-to-autointegration factor-like Neighboring gene uncharacterized LOC117075898 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial ribosomal protein S14

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022681470 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S100 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
calcyclin-binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tfra_2.0 Primary Assembly

Genomic

  1. NW_022681470.1 Reference Tfra_2.0 Primary Assembly

    Range
    31735411..31747945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033198688.1 → XP_033054579.1  calcyclin-binding protein isoform X2

    Conserved Domains (3) summary
    cd06468
    Location:32 → 124
    p23_CacyBP; p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter ...
    pfam05002
    Location:139 → 174
    SGS; SGS domain
    pfam09032
    Location:3 → 32
    Siah-Interact_N; Siah interacting protein, N terminal

  2. XM_033198686.1 → XP_033054577.1  calcyclin-binding protein isoform X1

    Related
    ENSTFRP00000026590.1, ENSTFRT00000033550.1
    Conserved Domains (3) summary
    cd06468
    Location:75 → 167
    p23_CacyBP; p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter ...
    pfam05002
    Location:182 → 217
    SGS; SGS domain
    pfam09032
    Location:4 → 75
    Siah-Interact_N; Siah interacting protein, N terminal

  3. XM_033198689.1 → XP_033054580.1  calcyclin-binding protein isoform X2

    Conserved Domains (3) summary
    cd06468
    Location:32 → 124
    p23_CacyBP; p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter ...
    pfam05002
    Location:139 → 174
    SGS; SGS domain
    pfam09032
    Location:3 → 32
    Siah-Interact_N; Siah interacting protein, N terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.