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GCDH glutaryl-CoA dehydrogenase [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117037804, updated on 30-Mar-2024

Summary

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Gene symbol
GCDH
Gene description
glutaryl-CoA dehydrogenase
See related
EnsemblRapid:ENSRFEG00010021270
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See GCDH in Genome Data Viewer
Location:
chromosome: 18
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 18 NC_046301.1 (48709049..48715084, complement)

Chromosome 18 - NC_046301.1Genomic Context describing neighboring genes Neighboring gene calreticulin Neighboring gene phenylalanyl-tRNA synthetase subunit alpha Neighboring gene synaptonemal complex central element protein 2 Neighboring gene KLF transcription factor 1 Neighboring gene deoxyribonuclease 2, lysosomal

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046301.1 Chromosome 18 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutaryl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutaryl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046301.1 Reference mRhiFer1_v1.p

    Range
    48709049..48715084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033134278.1 → XP_032990169.1  glutaryl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A671G2N8, A0A671G3D2
    Related
    ENSRFEP00010032244.2, ENSRFET00010034944.2
    Conserved Domains (1) summary
    cd01151
    Location:48 → 434
    GCD; Glutaryl-CoA dehydrogenase
Nucleotide Protein
Heading Accession and Version

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