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TKT transketolase [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117036841, updated on 30-Mar-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
See related
EnsemblRapid:ENSRFEG00010021261
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 17 NC_046300.1 (48676138..48698805, complement)

Chromosome 17 - NC_046300.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L32-like Neighboring gene protein kinase C delta Neighboring gene decapping mRNA 1A Neighboring gene calcium voltage-gated channel subunit alpha1 D Neighboring gene choline dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046300.1 Chromosome 17 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046300.1 Reference mRhiFer1_v1.p

    Range
    48676138..48698805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033132174.1 → XP_032988065.1  transketolase

    UniProtKB/TrEMBL
    A0A671GAR8, A0A7J7UL55
    Related
    ENSRFEP00010032212.1, ENSRFET00010034912.2
    Conserved Domains (1) summary
    PRK05899
    Location:8 → 620
    PRK05899; transketolase; Reviewed
Nucleotide Protein
Heading Accession and Version

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