U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NDST2 N-deacetylase and N-sulfotransferase 2 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117035833, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NDST2
Gene description
N-deacetylase and N-sulfotransferase 2
See related
EnsemblRapid:ENSRFEG00010017352
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NDST2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 16 NC_046299.1 (51175521..51181233, complement)

Chromosome 16 - NC_046299.1Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 1 Neighboring gene zinc finger SWIM-type containing 8 Neighboring gene translation initiation factor IF-2 Neighboring gene calcium/calmodulin dependent protein kinase II gamma Neighboring gene plasminogen activator, urokinase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_046299.1 Chromosome 16 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046299.1 Reference mRhiFer1_v1.p

    Range
    51175521..51181233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033129949.1 → XP_032985840.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A671FLS2, A0A7J7UXC9
    Related
    ENSRFEP00010026451.2, ENSRFET00010028743.2
    Conserved Domains (2) summary
    pfam00685
    Location:603 → 854
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 514
    HSNSD; heparan sulfate-N-deacetylase

  2. XM_033129950.1 → XP_032985841.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A7J7UXB8
    Conserved Domains (2) summary
    pfam00685
    Location:603 → 797
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 514
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.