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LDHD lactate dehydrogenase D [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117034658, updated on 30-Mar-2024

Summary

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Gene symbol
LDHD
Gene description
lactate dehydrogenase D
See related
EnsemblRapid:ENSRFEG00010014196
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See LDHD in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 15 NC_046298.1 (22627567..22632646, complement)

Chromosome 15 - NC_046298.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 59 Neighboring gene DNA-directed RNA polymerases I and III subunit RPAC2-like Neighboring gene zinc and ring finger 1 Neighboring gene ZFP1 zinc finger protein Neighboring gene chymotrypsinogen B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046298.1 Chromosome 15 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-lactate dehydrogenase (cytochrome) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables D-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lactate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable D-lactate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046298.1 Reference mRhiFer1_v1.p

    Range
    22627567..22632646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033127866.1 → XP_032983757.1  probable D-lactate dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A671F6H7
    Related
    ENSRFEP00010021129.2, ENSRFET00010023004.2
    Conserved Domains (1) summary
    PLN02805
    Location:22 → 485
    PLN02805; D-lactate dehydrogenase [cytochrome]
Nucleotide Protein
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