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ERLEC1 endoplasmic reticulum lectin 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117033013, updated on 30-Mar-2024

Summary

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Gene symbol
ERLEC1
Gene description
endoplasmic reticulum lectin 1
See related
EnsemblRapid:ENSRFEG00010013813
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See ERLEC1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 13 NC_046296.1 (33543623..33567804, complement)

Chromosome 13 - NC_046296.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L7-like Neighboring gene proteasome activator subunit 4 Neighboring gene ankyrin repeat and SOCS box protein 3 Neighboring gene ChaC glutathione specific gamma-glutamylcyclotransferase 2 Neighboring gene E3 ubiquitin-protein ligase Mdm2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046296.1 Chromosome 13 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde protein transport, ER to cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoplasmic reticulum lectin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046296.1 Reference mRhiFer1_v1.p

    Range
    33543623..33567804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033124866.1 → XP_032980757.1  endoplasmic reticulum lectin 1 isoform X1

    UniProtKB/TrEMBL
    A0A671F528, A0A671FE30
    Related
    ENSRFEP00010020682.1, ENSRFET00010022528.2
    Conserved Domains (2) summary
    pfam07915
    Location:342 → 421
    PRKCSH; Glucosidase II beta subunit-like protein
    cl06793
    Location:206 → 250
    PRKCSH; Glucosidase II beta subunit-like protein

  2. XM_033124867.1 → XP_032980758.1  endoplasmic reticulum lectin 1 isoform X2

    UniProtKB/TrEMBL
    A0A671F528
    Related
    ENSRFEP00010038026.1, ENSRFET00010059730.1
    Conserved Domains (2) summary
    pfam07915
    Location:316 → 395
    PRKCSH; Glucosidase II beta subunit-like protein
    cl06793
    Location:180 → 224
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein
Heading Accession and Version

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