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ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117032330, updated on 30-Mar-2024

Summary

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Gene symbol
ST6GALNAC4
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
See related
EnsemblRapid:ENSRFEG00010016180
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See ST6GALNAC4 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 12 NC_046295.1 (76923669..76932616, complement)

Chromosome 12 - NC_046295.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 1 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase like 1 Neighboring gene dolichyl-phosphate mannosyltransferase subunit 2, regulatory

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046295.1 Chromosome 12 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046295.1 Reference mRhiFer1_v1.p

    Range
    76923669..76932616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033123758.1 → XP_032979649.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:56 → 149
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_033123757.1 → XP_032979648.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A671FFB3
    Related
    ENSRFEP00010024230.1, ENSRFET00010026344.2
    Conserved Domains (1) summary
    pfam00777
    Location:56 → 289
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_033123760.1 → XP_032979651.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:56 → 149
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_033123759.1 → XP_032979650.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A671FFB3
    Conserved Domains (1) summary
    pfam00777
    Location:56 → 289
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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