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GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117030369, updated on 30-Mar-2024

Summary

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Gene symbol
GALNT18
Gene description
polypeptide N-acetylgalactosaminyltransferase 18
See related
EnsemblRapid:ENSRFEG00010001162
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See GALNT18 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 11 NC_046294.1 (41112094..41434212)

Chromosome 11 - NC_046294.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit E-like Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA57 Neighboring gene high mobility group protein B1-like Neighboring gene centromere protein K-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046294.1 Chromosome 11 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046294.1 Reference mRhiFer1_v1.p

    Range
    41112094..41434212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033120405.1 → XP_032976296.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A7J7W7B6
    Related
    ENSRFEP00010001604.2, ENSRFET00010001772.2
    Conserved Domains (2) summary
    cd02510
    Location:157 → 489
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:502 → 629
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_033120406.1 → XP_032976297.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    UniProtKB/TrEMBL
    A0A671DTR8, A0A7J7W7B6
    Related
    ENSRFEP00010049218.1, ENSRFET00010054829.1
    Conserved Domains (2) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:471 → 598
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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