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PMM1 phosphomannomutase 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117029300, updated on 30-Mar-2024

Summary

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Gene symbol
PMM1
Gene description
phosphomannomutase 1
See related
EnsemblRapid:ENSRFEG00010017564
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See PMM1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 10 NC_046293.1 (6435793..6444438)

Chromosome 10 - NC_046293.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein 13 Neighboring gene X-ray repair cross complementing 6 Neighboring gene desumoylating isopeptidase 1 Neighboring gene cold shock domain containing C2 Neighboring gene RNA polymerase III subunit H

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046293.1 Chromosome 10 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphomannomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphomannomutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046293.1 Reference mRhiFer1_v1.p

    Range
    6435793..6444438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033118485.1 → XP_032974376.1  phosphomannomutase 1

    UniProtKB/TrEMBL
    A0A671FRR5, A0A7J7WSH7
    Related
    ENSRFEP00010026409.1, ENSRFET00010028695.2
    Conserved Domains (1) summary
    cd02585
    Location:15 → 253
    HAD_PMM; phosphomannomutase, similar to human PMM1 and PMM2, Saccharomyces Sec53p, and Arabidopsis thaliana PMM
Nucleotide Protein
Heading Accession and Version

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