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CCDC115 coiled-coil domain containing 115 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117028591, updated on 30-Mar-2024

Summary

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Gene symbol
CCDC115
Gene description
coiled-coil domain containing 115
See related
EnsemblRapid:ENSRFEG00010003359
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See CCDC115 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 10 NC_046293.1 (91736659..91740222, complement)

Chromosome 10 - NC_046293.1Genomic Context describing neighboring genes Neighboring gene 60 kDa heat shock protein, mitochondrial-like Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene IMP U3 small nucleolar ribonucleoprotein 4 Neighboring gene protein tyrosine phosphatase non-receptor type 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046293.1 Chromosome 10 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 115

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046293.1 Reference mRhiFer1_v1.p

    Range
    91736659..91740222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033117381.1 → XP_032973272.1  coiled-coil domain-containing protein 115 isoform X2

  2. XM_033117380.1 → XP_032973271.1  coiled-coil domain-containing protein 115 isoform X1

    UniProtKB/TrEMBL
    A0A671E2Q4
    Related
    ENSRFEP00010004817.1, ENSRFET00010005278.2
Nucleotide Protein
Heading Accession and Version

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