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GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117028476, updated on 30-Mar-2024

Summary

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Gene symbol
GALNT6
Gene description
polypeptide N-acetylgalactosaminyltransferase 6
See related
EnsemblRapid:ENSRFEG00010016956
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See GALNT6 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 10 NC_046293.1 (51756938..51786413, complement)

Chromosome 10 - NC_046293.1Genomic Context describing neighboring genes Neighboring gene bridging integrator 2 Neighboring gene chymotrypsin like elastase 1 Neighboring gene uncharacterized LOC117028479 Neighboring gene solute carrier family 4 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046293.1 Chromosome 10 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046293.1 Reference mRhiFer1_v1.p

    Range
    51756938..51786413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033117107.1 → XP_032972998.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    A0A671FIP4
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_033117105.1 → XP_032972996.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    A0A671FIP4
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_033117103.1 → XP_032972994.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    A0A671FIP4
    Related
    ENSRFEP00010025460.1, ENSRFET00010027673.2
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_033117108.1 → XP_032972999.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    A0A671FIP4
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_033117106.1 → XP_032972997.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    A0A671FIP4
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  6. XM_033117104.1 → XP_032972995.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    A0A671FIP4
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  7. XM_033117109.1 → XP_032973000.1  polypeptide N-acetylgalactosaminyltransferase 6

    UniProtKB/TrEMBL
    A0A671FIP4
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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