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A3GALT2 alpha 1,3-galactosyltransferase 2 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117027790, updated on 30-Mar-2024

Summary

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Gene symbol
A3GALT2
Gene description
alpha 1,3-galactosyltransferase 2
See related
EnsemblRapid:ENSRFEG00010000470
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See A3GALT2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 9 NC_046292.1 (22824969..22835981, complement)

Chromosome 9 - NC_046292.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 62 Neighboring gene zinc finger protein 362 Neighboring gene polyhomeotic homolog 2 Neighboring gene zinc finger and SCAN domain containing 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046292.1 Chromosome 9 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046292.1 Reference mRhiFer1_v1.p

    Range
    22824969..22835981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033115916.1 → XP_032971807.1  alpha-1,3-galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A671DQW0
    Related
    ENSRFEP00010000579.1, ENSRFET00010000659.2
    Conserved Domains (1) summary
    cd02515
    Location:68 → 339
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

  2. XM_033115917.1 → XP_032971808.1  alpha-1,3-galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A671DJ34
    Related
    ENSRFEP00010000573.1, ENSRFET00010000651.2
    Conserved Domains (1) summary
    cd02515
    Location:62 → 333
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
Nucleotide Protein
Heading Accession and Version

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