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ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117026467, updated on 30-Mar-2024

Summary

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Gene symbol
ST6GALNAC3
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
See related
EnsemblRapid:ENSRFEG00010005733
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See ST6GALNAC3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 9 NC_046292.1 (56366188..56940941)

Chromosome 9 - NC_046292.1Genomic Context describing neighboring genes Neighboring gene DENN domain-containing protein 10-like Neighboring gene mutS homolog 4 Neighboring gene ankyrin repeat and SOCS box containing 17 Neighboring gene peroxiredoxin-5, mitochondrial-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC117027884 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046292.1 Chromosome 9 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046292.1 Reference mRhiFer1_v1.p

    Range
    56366188..56940941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033113214.1 → XP_032969105.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:70 → 135
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_033113213.1 → XP_032969104.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E568
    Related
    ENSRFEP00010008381.1, ENSRFET00010009215.2
    Conserved Domains (1) summary
    pfam00777
    Location:70 → 297
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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