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SLC35F5 solute carrier family 35 member F5 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117026101, updated on 30-Mar-2024

Summary

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Gene symbol
SLC35F5
Gene description
solute carrier family 35 member F5
See related
EnsemblRapid:ENSRFEG00010008610
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See SLC35F5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 8 NC_046291.1 (85559070..85598381, complement)

Chromosome 8 - NC_046291.1Genomic Context describing neighboring genes Neighboring gene NCK associated protein 5 Neighboring gene LY6/PLAUR domain containing 1 Neighboring gene G protein-coupled receptor 39 Neighboring gene actin related protein 3 Neighboring gene E3 ubiquitin-protein ligase SIAH1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046291.1 Chromosome 8 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of peptide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 35 member F5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046291.1 Reference mRhiFer1_v1.p

    Range
    85559070..85598381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033112596.1 → XP_032968487.1  solute carrier family 35 member F5 isoform X1

    UniProtKB/TrEMBL
    A0A671EIR1
    Related
    ENSRFEP00010012940.2, ENSRFET00010014159.2
    Conserved Domains (1) summary
    COG0697
    Location:246 → 471
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]

  2. XM_033112597.1 → XP_032968488.1  solute carrier family 35 member F5 isoform X2

    UniProtKB/TrEMBL
    A0A671ERE7
    Related
    ENSRFEP00010012957.1, ENSRFET00010014180.2
    Conserved Domains (1) summary
    COG0697
    Location:225 → 450
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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