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CPO carboxypeptidase O [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117026036, updated on 30-Mar-2024

Summary

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Gene symbol
CPO
Gene description
carboxypeptidase O
See related
EnsemblRapid:ENSRFEG00010010427
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See CPO in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 8 NC_046291.1 (25575248..25593204, complement)

Chromosome 8 - NC_046291.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 7 Neighboring gene small nucleolar RNA SNORA36 family Neighboring gene FAST kinase domains 2 Neighboring gene malate dehydrogenase 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046291.1 Chromosome 8 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase O

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046291.1 Reference mRhiFer1_v1.p

    Range
    25575248..25593204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033112439.1 → XP_032968330.1  carboxypeptidase O isoform X1

    UniProtKB/TrEMBL
    A0A671EQD2
    Related
    ENSRFEP00010015340.2, ENSRFET00010016750.2
    Conserved Domains (1) summary
    cd06247
    Location:14 → 311
    M14_CPO; Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase O subgroup

  2. XM_033112440.1 → XP_032968331.1  carboxypeptidase O isoform X2

    Conserved Domains (1) summary
    cl11393
    Location:14 → 281
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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