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GANC glucosidase alpha, neutral C [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117024233, updated on 30-Mar-2024

Summary

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Gene symbol
GANC
Gene description
glucosidase alpha, neutral C
See related
EnsemblRapid:ENSRFEG00010001000
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See GANC in Genome Data Viewer
Location:
chromosome: 6
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 6 NC_046289.1 (63146582..63207704, complement)

Chromosome 6 - NC_046289.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 106 Neighboring gene calpain 3 Neighboring gene uncharacterized LOC117024237 Neighboring gene uncharacterized LOC117024238 Neighboring gene transmembrane protein 87A Neighboring gene VPS39 subunit of HOPS complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046289.1 Chromosome 6 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046289.1 Reference mRhiFer1_v1.p

    Range
    63146582..63207704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033109704.1 → XP_032965595.1  neutral alpha-glucosidase C isoform X1

    UniProtKB/TrEMBL
    A0A671DK19, A0A671DT97
    Related
    ENSRFEP00010001419.1, ENSRFET00010001568.2
    Conserved Domains (2) summary
    cd06603
    Location:363 → 830
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:223 → 363
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  2. XM_033109706.1 → XP_032965597.1  neutral alpha-glucosidase C isoform X3

    UniProtKB/TrEMBL
    A0A671DK19
    Conserved Domains (2) summary
    cd06603
    Location:204 → 671
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:64 → 204
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  3. XM_033109705.1 → XP_032965596.1  neutral alpha-glucosidase C isoform X2

    UniProtKB/TrEMBL
    A0A671DK19, A0A671DKV1
    Related
    ENSRFEP00010001328.1, ENSRFET00010001467.2
    Conserved Domains (2) summary
    cd06603
    Location:353 → 820
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:213 → 353
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
Nucleotide Protein
Heading Accession and Version

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