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PLA2G4D phospholipase A2 group IVD [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117023696, updated on 30-Mar-2024

Summary

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Gene symbol
PLA2G4D
Gene description
phospholipase A2 group IVD
See related
EnsemblRapid:ENSRFEG00010001324
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See PLA2G4D in Genome Data Viewer
Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 6 NC_046289.1 (63327285..63353104)

Chromosome 6 - NC_046289.1Genomic Context describing neighboring genes Neighboring gene VPS39 subunit of HOPS complex Neighboring gene phospholipase A2 group IVF Neighboring gene phospholipase A2 group IVE Neighboring gene EH domain containing 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046289.1 Chromosome 6 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2 delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046289.1 Reference mRhiFer1_v1.p

    Range
    63327285..63353104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033108771.1 → XP_032964662.1  cytosolic phospholipase A2 delta

    UniProtKB/TrEMBL
    A0A671DLZ2, A0A7J7XQY0
    Related
    ENSRFEP00010001832.2, ENSRFET00010002033.2
    Conserved Domains (3) summary
    cd04036
    Location:23 → 142
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    pfam18695
    Location:164 → 275
    cPLA2_C2; Cytosolic phospholipases A2 C2-domain
    cl11396
    Location:276 → 812
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
Heading Accession and Version

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